Zhengdeng Lei, PhD

Zhengdeng Lei, PhD

2009 - Present Research Fellow at Duke-NUS, Singapore
2007 - 2009 High Throughput Computational Analyst, Memorial Sloan-Kettering Cancer Center, New York
2003 - 2007 PhD, Bioinformatics, University of Illinois at Chicago

Wednesday, July 27, 2011

Good Univ's


University of Calgary Calgary, Alberta
University of Alberta EdmontonAlberta
Dalhousie University HalifaxNova Scotia
McMaster University HamiltonOntario
Queen's University Kingston, Ontario
University of Western Ontario London, Ontario
University of Ottawa Ottawa, Ontario
University of Toronto Toronto, Ontario
University of Waterloo Waterloo, Ontario
University of British Columbia VancouverBritish Columbia

Tuesday, July 12, 2011

pvalues for affy probesets

library(affy)
setwd("/home/leiz/CEL/SGII192")
data <- ReadAffy()
eset_pma <- mas5calls(data)
pvalues <- assayDataElement(eset_pma, "se.exprs")
write.table(pvalues, "GC192.pvalues.txt", sep="\t")

Friday, July 8, 2011

glmnet cox

http://icb.med.cornell.edu/wiki/index.php/Elementolab/R_tutorial

Wednesday, June 29, 2011

http://www.cic.gc.ca/english/immigrate/skilled/complete-applications.asp

Wednesday, June 8, 2011

SCP without password

http://www.linuxjournal.com/article/8600
copy from your local machine to remote
1. At you local machine (e.g. Steve Server):
ssh-keygen -t rsa
#then enter, enter(default file)
all default (no phrase)
cd /home/leiz/.ssh

scp ~/.ssh/id_rsa.pub NUSSTF\\gmslz@172.25.138.12:/home/gmslz/.ssh/id_ras.pub.FromSteve

2. At remote machine (e.g. Cluster)
cd /home/gmslz/.ssh/
ls -la
cat id_ras.pub.FromSteve >>authorized_keys


DONE
you can scp from local (steve) to remote (cluster) without password



PS: get you local ip if no ifconfig in your local machine
netstat -an|grep "tcp"


172.25.136.25