Zhengdeng Lei, PhD
Zhengdeng Lei, PhD
2007 - 2009 High Throughput Computational Analyst, Memorial Sloan-Kettering Cancer Center, New York
2003 - 2007 PhD, Bioinformatics, University of Illinois at Chicago
Wednesday, July 27, 2011
Good Univ's
Tuesday, July 12, 2011
pvalues for affy probesets
library(affy)
setwd("/home/leiz/CEL/SGII192")
data <- ReadAffy()
eset_pma <- mas5calls(data)
pvalues <- assayDataElement(eset_pma, "se.exprs")
write.table(pvalues, "GC192.pvalues.txt", sep="\t")
setwd("/home/leiz/CEL/SGII192")
data <- ReadAffy()
eset_pma <- mas5calls(data)
pvalues <- assayDataElement(eset_pma, "se.exprs")
write.table(pvalues, "GC192.pvalues.txt", sep="\t")
Monday, July 11, 2011
Friday, July 8, 2011
glmnet cox
http://icb.med.cornell.edu/wiki/index.php/Elementolab/R_tutorial
Thursday, June 30, 2011
Wednesday, June 29, 2011
http://www.cic.gc.ca/english/immigrate/skilled/complete-applications.asp
Wednesday, June 8, 2011
SCP without password
http://www.linuxjournal.com/article/8600
copy from your local machine to remote
1. At you local machine (e.g. Steve Server):
ssh-keygen -t rsa
#then enter, enter(default file)
all default (no phrase)
cd /home/leiz/.ssh
scp ~/.ssh/id_rsa.pub NUSSTF\\gmslz@172.25.138.12:/home/gmslz/.ssh/id_ras.pub.FromSteve
PS: get you local ip if no ifconfig in your local machine
netstat -an|grep "tcp"
172.25.136.25
copy from your local machine to remote
1. At you local machine (e.g. Steve Server):
ssh-keygen -t rsa
#then enter, enter(default file)
all default (no phrase)
cd /home/leiz/.ssh
scp ~/.ssh/id_rsa.pub NUSSTF\\gmslz@172.25.138.12:/home/gmslz/.ssh/id_ras.pub.FromSteve
2. At remote machine (e.g. Cluster)
cd /home/gmslz/.ssh/
ls -la
cat id_ras.pub.FromSteve >>authorized_keys
DONE
you can scp from local (steve) to remote (cluster) without password
PS: get you local ip if no ifconfig in your local machine
netstat -an|grep "tcp"
172.25.136.25
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