Overlap of gene signatures of GC and PDA

1. Inv overlap signature_GC and signature_PDA, then DAVID/Gather


KEGG Pathway# Genesp ValueBayes Factor
1.path:hsa04010: MAPK signaling pathway19[show]      0.0051

2.path:hsa04020: Calcium signaling pathway16[show]      0.0071

3.path:hsa04210: Apoptosis10[show]     0.0071

4.path:hsa04610: Complement and coagulation cascades8[show]     0.010

Gene Ontology		# Genes		p Value		Bayes Factor
1.	GO:0007154 [3]: cell communication	156	[show]		< 0.0001	15
2.	GO:0007275 [2]: development	88	[show]		< 0.0001	9
3.	GO:0007165 [4]: signal transduction	123	[show]		< 0.0001	8
4.	GO:0009653 [3]: morphogenesis	62	[show]		< 0.0001	8
5.	GO:0009887 [4]: organogenesis	52	[show]		< 0.0001	7
6.	GO:0048513 [3]: organ development	52	[show]		< 0.0001	7
7.	GO:0006956 [6]: complement activation	8	[show]		0.0002	5
8.	GO:0007242 [5]: intracellular signaling cascade	50	[show]		0.0006	4

2. Pro

KEGG Pathway		# Genes		p Value		Bayes Factor
1.	path:hsa04110: Cell cycle	16	[show]		< 0.0001	11
2.	path:hsa04080: Neuroactive ligand-receptor interaction	2	[show]		0.001	2
3.	path:hsa00100: Biosynthesis of steroids	4	[show]		0.007	1

Gene Ontology		# Genes		p Value		Bayes Factor
1.	GO:0000278 [6]: mitotic cell cycle	35	[show]		< 0.0001	36
2.	GO:0007067 [8]: mitosis	29	[show]		< 0.0001	35
3.	GO:0000087 [7]: M phase of mitotic cell cycle	29	[show]		< 0.0001	35
4.	GO:0000279 [6]: M phase	32	[show]		< 0.0001	33
5.	GO:0000280 [7]: nuclear division	31	[show]		< 0.0001	33
6.	GO:0007049 [5]: cell cycle	62	[show]		< 0.0001	30
7.	GO:0008283 [4]: cell proliferation	73	[show]		< 0.0001	24
8.	GO:0000910 [5]: cytokinesis	18	[show]		< 0.0001	14

3.Meta

KEGG Pathway		# Genes		p Value		Bayes Factor
1.	path:hsa00480: Glutathione metabolism	3	[show]		0.0002	5
2.	path:hsa00260: Glycine, serine and threonine metabolism	2	[show]		0.003	2
3.	path:hsa00791: Atrazine degradation	1	[show]		0.004	1
4.	path:hsa00460: Cyanoamino acid metabolism	1	[show]		0.007	1
5.	path:hsa00430: Taurine and hypotaurine metabolism	1	[show]		0.009	1
6.	path:hsa00625: Tetrachloroethene degradation	1	[show]		0.009	1
7.	path:hsa00363: Bisphenol A degradation	1	[show]		0.01	0

Gene Ontology # Genes p Value Bayes Factor 1. GO:0007586 [4]: digestion 3 [show]         0.001 3 2. GO:0008203 [7]: cholesterol metabolism 3 [show]         0.001 3 3. GO:0016125 [6]: sterol metabolism 3 [show]         0.001 3 4. GO:0006848 [8]: pyruvate transport 1 [show]        0.005 2 5. GO:0007039 [7]: vacuolar protein catabolism 1 [show]        0.005 2 6. GO:0007165 [4]: signal transduction 3 [show]       0.01 1 7. GO:0045494 [8]: photoreceptor maintenance 1 [show]       0.01 1 8. GO:0006621 [6]: protein-ER retention 1 [show]       0.01 1