Zhengdeng Lei, PhD

Zhengdeng Lei, PhD

2009 - Present Research Fellow at Duke-NUS, Singapore
2007 - 2009 High Throughput Computational Analyst, Memorial Sloan-Kettering Cancer Center, New York
2003 - 2007 PhD, Bioinformatics, University of Illinois at Chicago

Friday, June 8, 2012

read cel file



library(affxparser)
celfile = "E:\\CEL\\BreastCancer\\GSE28821_LCM\\OneBatch\\GSM713753.CEL"
dat.header <- readCelHeader(celfile)$datheader
split.header <- strsplit(dat.header, " ")[[1]]
scan.date <- grep("\\d+\\/\\d+\\/\\d+", split.header, perl=T, value = T)
scan.time <- grep("\\d+:\\d+:\\d+", split.header, perl=T, value = T)

No comments:

Post a Comment